BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002C03LP1|AL424926
(1084 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1457 1052 0.0
>3x_Contig1457
Length = 7441
Score = 1052 bits (520), Expect = 0.0
Identities = 611/660 (92%), Gaps = 2/660 (0%)
Strand = Plus / Minus
Query: 24 ctaccactgccttatgctttcmacataccattttgataacggtgtgtytagagggttggc 83
||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||
Sbjct: 670 ctaccactgccttatgctttcaac-taccattttgataacggtgtgtttagagggttggc 612
Query: 84 ctttgcgaacytcactacyacggaagamactacmacggttgtccamagcttgaacggcaa 143
|||||||||| ||||||| |||||||| ||||| |||||||| || ||||||||||||||
Sbjct: 611 ctttgcgaacttcactactacggaagaaactacaacggttgttcaaagcttgaacggcaa 552
Query: 144 ggagatcggtggaaggmmatyaagagtggaatacmagamgatgttgccacaagcmgaaag 203
|||||||||||||||| || ||||||||||||| ||| ||||||||||||||| |||||
Sbjct: 551 ggagatcggtggaaggaaattaagagtggaatacaagaagatgttgccacaagcagaaag 492
Query: 204 ggagcstatcgmacgtcaaamgcgtgagacgcgagggccattggmagaacaacacagatc 263
||||| ||||| |||| ||| |||||||| |||||||| ||||| |||||||||||||||
Sbjct: 491 ggagcgtatcgaacgtgaaaagcgtgagaagcgagggcaattggaagaacaacacagatc 432
Query: 264 gatgagccatatctcgttgcmatcccyaggtgccacgccttcctcggcaccaccmggtgg 323
||||||| |||||||||||| ||||| ||||||||||||||||||||||||||| |||||
Sbjct: 431 gatgagcaatatctcgttgcaatccctaggtgccacgccttcctcggcaccaccaggtgg 372
Query: 324 cccttcaatggcctcgaacaactccycttctcagtcgttcaactcattcmtgaatgccga 383
||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||| ||
Sbjct: 371 cccttcaatggcctcgaacaactcctcttctcagttgttcaactcattcatgaatgcaga 312
Query: 384 ctctgcmgcccctggttctgtctcamtgggcactgttcctccmagtcctcaaccgtctat 443
|||||| || ||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 311 ctctgcagctcctggttctgtctcaatgggcactgttcctccaagtcctcaaccgtctat 252
Query: 444 tcaccatcatcattcccaactttctgctcammacactgcmgcctcyatgtcaatgctgtc 503
|||||||||||||||||||||||||||||| ||||||| || || ||||||||||||||
Sbjct: 251 tcaccatcatcattcccaactttctgctcaaaacactgcagcatctatgtcaatgctgtc 192
Query: 504 aatgccagggcttcctcamatgtccgasagactctatgctccattaccagccgccgccaa 563
||||| |||||||||||| |||||||| ||| ||||||||||||||||||| || |||||
Sbjct: 191 aatgcaagggcttcctcaaatgtccgagagattctatgctccattaccagcagctgccaa 132
Query: 564 cctcgtgttgccacctcagcagccagatttcmatga-ccctgacacacttgagatttaca 622
||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||
Sbjct: 131 cctcgtgttgccacctcagcagctagatttcaatgagccctgacacacttgagatttaca 72
Query: 623 gtcagttgcttttgttcaaagatagagaaaagagatattacgaattggcttaccctatcg 682
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 71 gtcagttgcttttgttcaaagatagagaaaagagatattacgaattggcttagcctatcg 12
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4340
Number of Sequences: 1807
Number of extensions: 4340
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 1084
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1068
effective length of database: 10,329,639
effective search space: 11032054452
effective search space used: 11032054452
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.8 bits)
S2: 50 (101.6 bits)